Ecology

Photosynthetic traits as indicators for phenotyping urban and peri-urban forests. A case study in the metropolitan city of Rome

Phenotyping for functional traits associated with photosynthetic machinery could be a promising approach for studying the performance of green infrastructures in metropolitan areas. Trait-based indicators hold important information about ecosystem processes and how environmental constrains may influence the provisioning of services.

Commentary: EPA's proposed expansion of dose-response analysis is a positive step towards improving its ecological risk assessment

The United States Environmental Protection Agency (US EPA) has recently proposed changes to strengthen the transparency of its pivotal regulatory science policy and procedures. In this context, the US EPA aims to enhance the transparency of dose-response data and models, proposing to consider for the first time non-linear biphasic dose-response models.

First record of the invasive and cryptogenic species Jassa slatteryi Conlan, 1990 (Crustacea: Amphipoda) in Italian coastal waters

Jassa slatteryi is a cosmopolitan amphipod reported as cryptogenic or invasive species throughout the world. Although it had been signaled in the Mediterranean Sea, it was never found on the Italian coasts. This study represents the first record of J. slatteryi in Italy. A total of 87 specimens were collected on artificial hard substrates in the Port of Civitavecchia (Rome). The presence of this species in the Mediterranean Sea was probably underestimated due to the similar morphological features and ecological requirements of different species of Jassa spp.

Investigating the genetic structure of trout from the Garden of Ninfa (central Italy). Suggestions for conservation and management

Mediterranean populations of brown trout (Salmo trutta L. complex) have lost a large part of their genetic distinctiveness, mostly due to massive restocking, and the waters of the Gardens of Ninfa (province of Latina, central Italy, Site of Community Importance since 2013) are regarded as one of a few potential reservoirs of autochthonous trout lineages in the Tyrrhenian drainage of the Italian peninsula.

Alien plant species do have a clear preference for different land uses within urban environments

Since neophytes can become invasive in the future, untangling their ecological preferences is of paramount importance, especially in urban areas where they represent a substantial proportion of the local flora. Studies exploring alien species assemblages in urban environments are however scarce. This study aims to unravel alien plant species preferences for five urban land uses (densely built-up areas, open built-up areas, industrial areas, broadleaved urban forests, and agricultural areas and small landscape elements).

A new method for quantifying the phylogenetic redundancy of biological communities

The increasing use of phylogenetic methods in community ecology recognizes that accumulated evolutionary differences
among species mirror, to some extent, ecological processes. The scope of this work is thus to propose a new method for the
measurement of community-level phylogenetic redundancy, which takes into account the branching pattern of the underlying
phylogeny. Like for functional redundancy, a measure of phylogenetic redundancy can be described as a normalized

Remotely sensed spatial heterogeneity as an exploratory tool for taxonomic and functional diversity study

Assessing biodiversity from field-based data is difficult for a number of practical reasons: (i) establishing the total
number of sampling units to be investigated and the sampling design (e.g. systematic, random, stratified) can be
difficult; (ii) the choice of the sampling design can affect the results; and (iii) defining the focal population of
interest can be challenging. Satellite remote sensing is one of the most cost-effective and comprehensive approaches

Estimating tree species diversity from space in an alpine conifer forest. The Rao's Q diversity index meets the spectral variation hypothesis

Forests cover about 30% of the Earth surface, they are among the most biodiverse terrestrial ecosystems and represent the bulk of many ecological processes and services. The assessment of biodiversity is an important and essential goal to achieve but it can results difficult, time consuming and expensive when based on field data. Remote sensing covers large areas and provides consistent quality and standardized data, which can be used to estimate species diversity.

Measuring functional dissimilarity among plots. Adapting old methods to new questions

Ecologists routinely use dissimilarity measures between pairs of plots to explore the complex mechanisms that drive community assembly. Traditional dissimilarity measures usually quantify plot-to-plot dissimilarity based either on species presences and absences within plots or on species abundances, thus assuming that all species are equally and maximally distinct from one another. However, the value of dissimilarity measures that incorporate information on functional differences among species is becoming increasingly recognized.

Next Generation Metagenomics: Methodological Challenges and Opportunities

Metagenomics is one of the newest omics system science technologies but also one that has arguably the broadest set of applications and impacts globally. Metagenomics has found vast utility not only in environmental sciences, ecology and public health but also in clinical medicine and looking into the future, in planetary health. In line with the One Health concept, metagenomics solicits collaboration between molecular biologists, geneticists, microbiologists, clinicians, computational biologists, plant biologists, veterinarians and other healthcare professionals.

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