ancient DNA

Ancient DNA analysis of dental calculus to infer lifestyle, health and origin of human populations

Ancient DNA analysis of dental calculus to infer lifestyle, health and origin of human populations

With Katerina Guschanski (University of Edinburgh) and Mary Anne Tafuri (Sapienza University) we are using ancient DNA extracted from dental calculus of classical and post-classical individuals dating to I-VIII century CE, to gain novel insights into the diets, health statuses, and origins of human populations that lived in central Italy.

Recontructing paleoenvironments using ancient DNA

Recontructing paleoenvironments using ancient DNA

We are using the metabarcoding tecnique on sedimentary DNA (sedDNA) from three volcanic Italian lakes: Lago Grande di Monticchio, Lago di Nemi, and Lago di Martignano. At Monticchio, we have already identified over 90 plant taxa from a long sediment core covering the period from 1.4 to 31 thousand years before present. To maximize our results, we have developed new strategies to improve DNA extraction from mineral-adsorbed samples and counteract PCR inhibition. We are also testing new probes designed to capture short plant DNA sequences using shotgun sequencing.

Holocene book review: Environmental DNA: For Biodiversity Research and Monitoring

Environmental DNA (eDNA) analysis is an efficient and easy-to-standardise molecular tool that has gained widespread importance during the past 10 years, as part of the worldwide campaign to investigate and monitor biodiversity by using globally accessible DNA-based systems (iBOL; https://ibol.org). Genetic methods are increasingly used to assess species diversity, as they are faster and often allow better taxonomic resolution than manual identification methods. However,...

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