Comparative transcriptomic and metabolic profiling identification a novel targets of lung Cancer Stem Cells

Anno
2021
Proponente Claudia De Vitis - Ricercatore
Sottosettore ERC del proponente del progetto
LS4_6
Componenti gruppo di ricerca
Componente Categoria
Vittorio Castaldo Dottorando/Assegnista/Specializzando componente non strutturato del gruppo di ricerca
Componente Qualifica Struttura Categoria
Giulia Ricci Professore Associato università degli studi della Campania Luigi Vanvitelli Altro personale aggregato Sapienza o esterni, titolari di borse di studio di ricerca
Biamonte Flavia Professore Associato Università degli Studi "Magna Graecia"¿ di Catanzaro Altro personale aggregato Sapienza o esterni, titolari di borse di studio di ricerca
Matteo Pallocca Bioinformatic IRCCS Regina Elena Altro personale aggregato Sapienza o esterni, titolari di borse di studio di ricerca
Valentina Salvati tecnico di laboratorio IRCCS Regina Elena Altro personale aggregato Sapienza o esterni, titolari di borse di studio di ricerca
Abstract

Cancer stem cells (CSCs) are the leading cause of cancer initiation, metastasis and chemoresistance, thus eliminating them could lead to permanent cancer eradication. CSCs have a unique genotipic phenotype and exhibit metabolic plasticity based on the tumor
microenvironment. 
we compared the metabolic fingerprints of H460 cancer cell culture cells grown as adherent (2D) or as three-dimensional (3D) tumor spheroids in a spheroid medium and low- serum medium. Tumor spheroids are an optimal in vitro model to enrich the CSCs subpopulations and to mimic the trascrittomic shift and the 3D inter-cellular transport of nutrients and oxygen.
Multivariate analysis showed a significant shift from the 2D typical oxidative metabolism to a glycolytic and gluconeogenesis metabolism in 3D conditions. Indeed, 3D cultures showed changes of glycolytic intermediates (D-Glucose-6P, D-Fructose-6P, Dihydroxiacetone phosphate) as well as intracellular accumulation of lactic acid.
In 3D the intracellular concentration of AAs was strongly reduced compared to 2D, thus suggesting either higher utilization or reduced production; the latter, could be associated with the lower proliferation rate of H460 cells in 3D cultures. Strikingly, 2D cultures showed use aspartate to generate asparagine that support mTOR, this is not observed in 3D. Overall, this study indicates that lung CSCs use glycolysis/gluconeogenesis and AAs metabolism to satisfy their energy demands and these could certainly play a key role in the acquisition of stemness-like properties. Further experiments, i.e. transcriptional analysis will be performed to validate our preliminary results. Metabolomics approaches are powerful tools for the direct profiling of cell metabolism and to uncover mechanisms of transcriptional activation of metabolic pathway in CSCs.

ERC
LS4_6, LS2_8, LS2_10
Keywords:
BASI BIOLOGICHE DEL CANCRO, METABOLISMO LIPIDICO, TRASCRITTOMICA, BIOLOGIA MOLECOLARE E INTERAZIONI, BIOLOGIA CELLULARE

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